The transom actually looks pretty good to me. Having gone this far, what I might do is take it out and really check it over. If it's good, I'd probably apply some epoxy resin and paint and that should preserve it for a good long time, and not add too much to the thickness so you could get it back in easily. If it's lasted this long untreated, that's pretty good. You know to especially check the integrity around any through-holes & goop it up with 5200 anywhere something goes through it.
Keep up the good work!
GA I was fortunate that there wasn't any residue from the carpet or side panels, i've seen some bad ones also. But I do have the transom skin that looks like swiss cheeseNice and clean. Your side trays don't appear to have any glue residue. Usually they're a holy mess.
Lakelover I had seen ads for the Rusto marine paints but have never seen them stocked anywhere here.
I tried the roll and tip method and gave up on it. I now spray everything, much easier and better results.
On bare aluminum I use Zinc Chromate, it comes in green or yellow. Guaranteed to stick to bare aluminum, it's the best. I rolled my 12 footer. it looks pretty good, spray may be easier though. I rolled and rolled, my next I'll try to spray. The roll and roll method is pretty good, as with anything there is a learning curve lol.
You don't really need the marine though, I think it's been debated whether there was anything really special about it anyway.
I would use the marine primer, however, if only because I've had good results with it.