So, just got back from a test run with the new CDI. All the old connections were clean but I shmutzed the new ones up with dialectric grease for good measure. I adjusted the linkage 2 turns which put the timing arrow on the marks. Checked with a timing light and it was bouncing between 6 and 8 degrees ATDC. Starting it up it immediately sounded nice although the idle is a little low and I will adjust it when I get my new Tachometer on Thurs.
Out on the water it was obvious right from the start things were better and the only problem was cavitation. Before putting the boat in for the first time after I bought it, I noticed the motor was way low, so I moved it up about 2.5 inches. Well, that might have been fine for a regular V-hull but I have found with pontoons and catamarans that that setting is not as straight forward. So back down it will go (a little) but first I want to test a new prop.
This is, as I said, a pontoon boat and so the 11X15 prop that was on it was pitched way too high for a 50HP on a 20' boat. I opted for a 12X10 (which is in the recommended range) and I expect I will be satisfied.
So, all's well that ends well. She ran real nice up on plane even with the cavitating and I feel real bad about all those filthy names I called her before.