I think this is a case of fixing something that isn't broken.
My boats have/had fishfinders/gps on them and have never had issues starting the boat after use. Bayliner had an Eagle (forget the model), Four Winns had an Eagle Fish Elite, and Chap has a Garmin Styker 4 Plus (desparately needs replacement as the screen is way, way too small and GPS is horrible). Typical day is go from dock 5-15 min to fishing spot, kill the engine, drift/anchor/troll, move as needed, go back to dock for meal then rinse & repeat.
If you're overly concerned about your battery surviving....replace it with one with more reserve capacity. I got 5 years out of mine before replacement was required.