Cutty and small ski locker box have drain holes whereas both compartments had standing water. I snaked them anticipating the snake to enter the bilge. It didn't, but went forever. Where does the water drain too? Apparently not into the bilge.
Debris could be blocking the drain area. I had to take a stiff really long stick of wood go in through the transom plug, under the motor and all the way through to the ski locker area, kept working it in/out and getting the junk freed up. Them poke at the drain in the ski locker to free up the stuff in there. Mine had a false floor in that area. Poor design.