Re: Rewiring trailer, should I had Aux 12 V+ to charge boat batteries?
no... at least not without a charge controller/regulator on board. It will be fine if the batteries are nearly full and you are just topping them off. (which in that case, why? far too much work, no reward)
If the batteries are discharged you will at best blow a fuse on the truck. Worst case is you melt the trailer connector. (nevermind that trying to charge 2 discharged deep cycles from a standard vehicle alternator is a good way to get to know your local auto parts guy on a frequent basis!) Vehicles that do this sort of thing (rv's) have heavy duty or dual alternators, and some serious cable running to the secondary batteries.