Re: install lower unit.
Turn the driveshaft clockwise (same direction the motor turns as viewed from the top) and figure out what gear you're in.
If it's in fwd gear (most likely), the propshaft will be rotating clockwise as viewed from behind the boat.
Turn the shift shaft CCW until you feel slight resistance then there should be a 'notch' that you feel, this should be neutral. The propshaft will move freely in both directions. Note that the shift shaft can move around a bunch when in forward, but there is only one correct position for it to be in, for correct shifting.
If the L/U is already in neutral, leave it there.
If it's in reverse (propshaft rotating CCW), turn the shift shaft clockwise one 'notch' to get to neutral.
I'm assuming your motor has the outside lever connection for shift/throttle cables. Disconnect the shift cable and move the shift lever on the motor to about mid-center of its travel.
Then reinstall the lower unit, still in neutral, with the shift lever centered. You may have to move the lever just a bit one way or the other to get the upper shift rod lined up with the shift shaft.
You'll also need to move the flywheel a bit in the clockwise direction to get crankshaft and driveshaft engaged.
Last tip, while you're inserting the lower unit, shine a flashlight in the gap between gearcase & exhaust tower and make sure the copper water pump tube is engaging the water pump's rubber sealing grommet. Otherwise you'll get no water pumping.
Hopefully that gets you going and the weather's decent tomorrow. We've been praying for more sun all week, the grass is getting way too tall and it's too wet to mow. Plus it would be nice to get out on the lake!
HTH.........ed