Chopperbill,
If you manage to get engine/transom dialed at sweet height spot you will boat happily on most water scenarios. When going over large wakes you should throttle down to cross it nicely, you're on a sib, not a rib.
What you say is correct, engine/transom behaviour will change accordingly if your weight is aft, middle or at bow or even with under inflated tubes. What you need to so is sit wify at bow for even distributed deck weight, go for a water spin, trimmed to a hole in which you achieve engine sittting at 90 deg and sib riding parallel to water level.
Once there, pull head backwards and check water flow height passing through LU to determine if in need to raise or lower engine accordingly, if you don't look will be wild guessing endlessly. Post you findings with wify siting up front.
Happy Boating